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SRX9818581: Lake Constance metagenome
1 PACBIO_SMRT (Sequel) run: 90,250 spots, 168.1M bases, 81.8Mb downloads

Design: November 2017 was in additionally sequenced by SMRT sequencing on a RSII instrument (Pacific Biosciences)
Submitted by: University of Constance
Study: Lake Constance metagenome
show Abstracthide Abstract
Lake Constance is the largest lake in Germany with a volume of 48 km3 and a maximum depth of 250 m. It is oligotrophic and has a permanently oxygenated hypolimnion throughout the year and serves as a drinking water reservoir for more than 5 million people. Samples were taken in 85m depth and was pre-filtered through a 70 and 30 micron nylon mesh and filtered on board onto 5 and 0.2 micron polycarbonate filters. DNA was extracted from 0.2 micron filters to obtain genomic DNA for metagenome sequencing.
Sample: Illumina sequencing
SAMN17277997 • SRS8001589 • All experiments • All runs
Library:
Name: Lake_Constance_Nov_2017_PacBio
Instrument: Sequel
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 90,250 spots, 168.1M bases, 81.8Mb
Run# of Spots# of BasesSizePublished
SRR1339948790,250168.1M81.8Mb2022-02-08

ID:
12864449

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